Table 6: The sequence (1) is located in an intronic sequence of PHF21A (PHD finger protein 21A) on chromosome 11 (reverse strand) at 46.053.694-46.054.066 and it is annotated by UCSC as RPL22 retrogene, but not by Ensembl. The sequence (2) is located on chromosome 21 (reverse strand) at 41.135.115-41.135.527. This sequence is annotated neither by UCSC nor by Ensembl. We can consider this sequence as a fragment because of its low query coverage in the BLASTN alignment (40%). The algorithm found one duplicated sequence of RPL22P14 on the forward strand of chromosome 6 (not shown). The pseudogene RPL22P17 was not detected.
chromosome z-score query coverage percent identity
RPL22 1 (-1)
RPL22P19 12 (-1) 61.84 99% 90.98%
RPL22P11 2 (-1) 64.98 99% 93.01%
AC012443.1 2 (-1) 26.93 52% 82.38%
RPL22P18 10 (+1) 56.97 96% 81.63%
RPL22P24 1 (-1) 50.34 99% 85.05%
RPL22P23 X (-1) 49.30 90% 87.75%
RPL22P7 2 (-1) 51.39 99% 86.53%
RPL22P17 10 (-1)
RPL22P20 14 (+1) 58.71 99% 90.41%
RPL22P1 3 (-1) 62.89 91% 98.03%
RPL22P10 2 (+1) 59.74 95% 91.91%
RPL22P22 X (-1) 58.71 99% 90.16%
RPL22P16 7 (-1) 59.41 99% 91.45%
RPL22P12 2 (+1) 64.28 99% 92.51%
RPL22P4 1 (-1) 56.62 99% 88.07%
RPL22P3 1 (-1) 61.84 98% 91.58%
RPL22P5 1 (-1) 56.62 99% 88.07%
RPL22P6 1 (-1) 56.97 99% 88.32%
RPL22P8 2 (+1) 63.59 99% 91.97%
RPL22P21 17 (+1) 38.00 71% 83.45%
RPL22P2 14 (-1) 63.94 95% 94.88%
RPL22P13 4 (+1) 15.84 66% 71.12%
RPL22P14 6 (+1) 43.02 98% 82.12%
(1) 11 (-1) 31.17 86% 90.98%
(2) 21 (-1) 16.18 40% 79.38