Table 6: The sequence (1) is located in an intronic sequence of PHF21A (PHD finger protein 21A) on chromosome 11 (reverse strand) at 46.053.694-46.054.066 and it is annotated by UCSC as RPL22 retrogene, but not by Ensembl. The sequence (2) is located on chromosome 21 (reverse strand) at 41.135.115-41.135.527. This sequence is annotated neither by UCSC nor by Ensembl. We can consider this sequence as a fragment because of its low query coverage in the BLASTN alignment (40%). The algorithm found one duplicated sequence of RPL22P14 on the forward strand of chromosome 6 (not shown). The pseudogene RPL22P17 was not detected.
| chromosome | z-score | query coverage | percent identity |
RPL22 | 1 (-1) | | | |
RPL22P19 | 12 (-1) | 61.84 | 99% | 90.98% |
RPL22P11 | 2 (-1) | 64.98 | 99% | 93.01% |
AC012443.1 | 2 (-1) | 26.93 | 52% | 82.38% |
RPL22P18 | 10 (+1) | 56.97 | 96% | 81.63% |
RPL22P24 | 1 (-1) | 50.34 | 99% | 85.05% |
RPL22P23 | X (-1) | 49.30 | 90% | 87.75% |
RPL22P7 | 2 (-1) | 51.39 | 99% | 86.53% |
RPL22P17 | 10 (-1) | | | |
RPL22P20 | 14 (+1) | 58.71 | 99% | 90.41% |
RPL22P1 | 3 (-1) | 62.89 | 91% | 98.03% |
RPL22P10 | 2 (+1) | 59.74 | 95% | 91.91% |
RPL22P22 | X (-1) | 58.71 | 99% | 90.16% |
RPL22P16 | 7 (-1) | 59.41 | 99% | 91.45% |
RPL22P12 | 2 (+1) | 64.28 | 99% | 92.51% |
RPL22P4 | 1 (-1) | 56.62 | 99% | 88.07% |
RPL22P3 | 1 (-1) | 61.84 | 98% | 91.58% |
RPL22P5 | 1 (-1) | 56.62 | 99% | 88.07% |
RPL22P6 | 1 (-1) | 56.97 | 99% | 88.32% |
RPL22P8 | 2 (+1) | 63.59 | 99% | 91.97% |
RPL22P21 | 17 (+1) | 38.00 | 71% | 83.45% |
RPL22P2 | 14 (-1) | 63.94 | 95% | 94.88% |
RPL22P13 | 4 (+1) | 15.84 | 66% | 71.12% |
RPL22P14 | 6 (+1) | 43.02 | 98% | 82.12% |
(1) | 11 (-1) | 31.17 | 86% | 90.98% |
(2) | 21 (-1) | 16.18 | 40% | 79.38 |