Table 5: The sequence (1) coincides to an intronic sequence of PAK2 (p21 activated kinase 2) on chromosome 3 (forward strand) at 196.823.591-196.824.193. The sequence (2) is aligned by the Ensembl gene browser with the 3’ portion of the novel transcript FP565171.1 on chromosome 10 (forward strand) at 131.895.114-131.895.702. They are both annotated by UCSC as RPL19 retrogenes, but not by Ensembl. Two duplicated sequences, one of AC007683, the other of RPL19P13, were found on chromosomes 7 (forward strand) and 8 (reverse strand) respectively (not shown in the table). Three pseudogenes of RPL19 were not detected (AC092824.1, AC021660.1 and RPL19P1).
| chromosome | z-score | query coverage | percent identity |
RPL19 | 17 (+1) | | | |
AL161742.1 | 1 (-1) | 88.28 | 99% | 91.36% |
AC097358.1 | 3 (+1) | 86.98 | 99% | 91.31% |
AL359092.2 | 9 (+1) | 83.09 | 99% | 90.44% |
AC133435.1 | 3 (-1) | 84.07 | 99% | 91.54% |
AC092824.1 | 12 (-1) | | | |
AC021660.1 | 3 (+1) | | | |
AC095041.1 | 4 (+1) | 86.33 | 100% | 90.37% |
AC010326.1 | 19 (-1) | 72.08 | 98% | 83.32% |
AC136632.1 | 5 (+1) | 99.94 | 99% | 97.29% |
AC007683.1 | 7 (-1) | 95.73 | 99% | 95.25% |
AC068137.1 | 2 (+1) | 85.36 | 98% | 90.91% |
AC091980.1 | 5 (-1) | 88.28 | 99% | 91.50% |
AC009997.1 | 15 (+1) | 14.11 | 23% | 93.43% |
AC021016.1 | 2 (+1) | 74.03 | 85% | 91.88% |
RPL19P20 | X (+1) | 87.95 | 99% | 91.17% |
RPL19P21 | X (+1) | 94.11 | 99% | 94.24% |
RPL19P13 | 8 (+1) | 81.80 | 99% | 88.44% |
RPL19P14 | 8 (+1) | 79.21 | 97% | 87.35% |
RPL19P18 | 17 (-1) | 71.11 | 99% | 84.09% |
RPL19P11 | 5 (+1) | 86.66 | 99% | 90.36% |
RPL19P16 | 10 (-1) | 76.29 | 99% | 89.59% |
RPL19P1 | 20 (+1) | | | |
(1) | 3 (+1) | 23.82 | 60% | 73.90% |
(2) | 10 (+1) | 88.93 | 99% | 91.86% |